Universally applicable, quantitative PCR method utilizing fluorescent nucleobase analogs

No universally applicable thermal dose descriptor.

A universally applicable internal standard for PCR detection of Wuchereria bancrofti in biological samples.

A PCR-based assay have been previously described to detect Wuchereria bancrofti in mosquitoes and in human blood samples. However, the efficiency of PCR amplification may vary between samples depending on the presence of PCR inhibitors, leading sometimes to false negative results. To overcome this drawback, an internal standard plasmid (pWB11) was constructed. It can be added to each PCR reacti...

A universally applicable method of operon map prediction on minimally annotated genomes using conserved genomic context

An important step in understanding the regulation of a prokaryotic genome is the generation of its transcription unit map. The current strongest operon predictor depends on the distributions of intergenic distances (IGD) separating adjacent genes within and between operons. Unfortunately, experimental data on these distance distributions are limited to Escherichia coli and Bacillus subtilis. We...

Simple, Rapid and Inexpensive Quantitative Fluorescent PCR Method for Detection of Microdeletion and Microduplication Syndromes

Because of economic limitations, the cost-effective diagnosis of patients affected with rare microdeletion or microduplication syndromes is a challenge in developing countries. Here we report a sensitive, rapid, and affordable detection method that we have called Microdeletion/Microduplication Quantitative Fluorescent PCR (MQF-PCR). Our procedure is based on the finding of genomic regions with ...

Rapid and Inexpensive Screening of Genomic Copy Number Variations Using a Novel Quantitative Fluorescent PCR Method

Detection of human microdeletion and microduplication syndromes poses significant burden on public healthcare systems in developing countries. With genome-wide diagnostic assays frequently inaccessible, targeted low-cost PCR-based approaches are preferred. However, their reproducibility depends on equally efficient amplification using a number of target and control primers. To address this, the...